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Fluorescently labeled xylosides offer insight into the biosynthetic pathways of glycosaminoglycans

Five novel xylosides tagged with the fluorescent probe Pacific Blue™ were synthesized and found to act as substrates for β4GalT7, a bottleneck enzyme in the biosynthetic pathways leading to glycosaminoglycans. By confocal microscopy of A549 cells, we showed that the xylosides were taken up by the cells, but did not enter the Golgi apparatus where most of the glycosaminoglycan biosynthesis occurs.

Hydroxybenzamide/pyrrole pair distinguishes T·A from A·T base pairs in the minor groove of DNA

A new aromatic pair, 2-hydroxy-6-methoxybenzamide/1-methylpyrrole at the terminal position of hairpin polyamides has been designed for distinguishing T·A from A·T base pairs and both from G·C/C·G in the minor groove of DNA. Four eight-ring hairpin polyamides with benzamide (Bz), 2-hydroxybenzamide (Hb-1), 2-hydroxy-6-methylbenzamide (Hb-2), and 2-hydroxy-6-methoxybenzamide (Hb-3) at the N-terminal

A high yielding chemical synthesis of sialyl Lewis x tetrasaccharide and Lewis x trisaccharide; examples of regio- and stereodifferentiated glycosylations

Virtually complete regioselective galactosylation of the diol acceptor p-methoxyphenyl 6-O-benzyl-2-deoxy-2-tetrachlorophthalimido-β-D- glucopyranoside (8) with the donor phenyl 2,3,4-tri-O-acetyl-6-O-benzyl-1- thio-β-D-galactopyranoside (11) gave the lactosamine derivative 14, which was fucosylated with the donor 15 to give the Le(x) trisaccharide glycoside 2 after deprotection. Regioselective si

Synthesis of lactam and acetamido analogues of sialyl Lewis x tetrasaccharide and Lewis x trisaccharide

Virtually complete regioselective galactosylation of the diol acceptor p-methoxyphenyl 6-O-benzyl-2-deoxy-2-tetrachlorophthalimido-β-D- glucopyranoside (15) with the donors ethyl 3,4-di-O-acetyl-6-O-benzyl-2- deoxy-2-[[(2,2,2-trichloroethoxy)carbonyl]amino]-1-thio-β-D- galactropyranoside (14), 4-methylphenyl 2,3-di-O-acetyl-4-azido-6-O-benzyl- 4-deoxy-1-thio-β-D-galactopyranoside (30), and 4-methy

Epidemiological register studies on pain - etiology, treatment, and mental health

Pain is common in life and can be caused by trauma or underlying disease and is mostly temporary, but for some the pain can develop into a chronic pain condition. Pain leads to individual suffering as well as negative impact on the wider society. Especially since pain can start early in life and affect large parts of it. The aim of this thesis was to identify potential risk factors for chronic and

High-quality annotations for deep learning enabled plaque analysis in SCAPIS cardiac computed tomography angiography

Background: Plaque analysis with coronary computed tomography angiography (CCTA) is a promising tool to identify high risk of future coronary events. The analysis process is time-consuming, and requires highly trained readers. Deep learning models have proved to excel at similar tasks, however, training these models requires large sets of expert-annotated training data. The aims of this study were

Effects of wing damage and moult gaps on vertebrate flight performance

Vertebrates capable of powered flight rely on wings, muscles that drive their flapping and sensory inputs to the brain allowing for control of the motor output. In birds, the wings are formed of arrangements of adjacent flight feathers (remiges), whereas the wings of bats consist of double-layered skin membrane stretched out between the forelimb skeleton, body and legs. Bird feathers become worn f

Direct conversion from mouse fibroblasts informs the identification of hemogenic precursor cells in vivo

Definitive hematopoiesis emerges via an endothelial-to-hematopoietic transition in the aorta-gonad-mesonephros (AGM) region and placenta. We have recently demonstrated the induction of hematopoietic stem/progenitors (HSPCs) from mouse fibroblasts with a combination of transcription factors progressing through endothelial-like precursors. Here, guided by our in vitro programming experiments we anal

Gauge-invariant absorption of light from a coherent superposition of states

Absorption and emission of light is studied theoretically for excited atoms in coherent superposition of states subjected to isolated attosecond pulses in the extreme ultraviolet range. A gauge-invariant formulation of transient absorption theory is motivated using the energy operator from Yang's gauge theory. The interaction, which simultaneously couples both bound and continuum states, is simula

Zero footprint induction of human hemogenesis to study pathologic developmental hematopoiesis in fanconi anemia

The inability to culture hematopoietic stem cells (HSCs) in vitro hinders the full study of physiologic and pathologic hematopoiesis “in a dish.” Recent efforts have been taken to generate HSCs via transcription factor (TF) mediated reprogramming. Most of these studies, however, rely on lentiviruses capable of genomic integration, running the risk of insertional mutagenesis and oncogenesis. Applic

Mechanisms underlying human hemogenic reprogramming

The direct conversion of somatic cells into hematopoietic stem cells (HSCs) by ectopic expression of transcription factors (TFs) is a promising approach for regenerative medicine. Our lab demonstrated recently the conversion of mouse fibroblasts into hemogenic cells with just 3 core TFs (Gata2, Gfi-1b, cFos) (Pereira et al 2013). The transduced cells undergo an endothelial-to-hematopoietic transit

Oxygen relocation during HfO2 ALD on InAs

Atomic layer deposition (ALD) is one of the backbones for today’s electronic device fabrication. A critical property of ALD is the layer-by-layer growth, which gives rise to the atomic-scale accuracy. However, the growth rate - or growth per cycle - can differ significantly depending on the type of system, molecules used, and several other experimental parameters. Typically, ALD growth rates are c

B Cells and Tertiary Lymphoid Structures : Friends or Foes in Cancer Immunotherapy?

Tumor cells pose a challenge to the adaptive immune system, and its key cell types, T and B cells, have frequently been associated with an improved prognosis. The success of immune checkpoint blockade has confirmed the relevance of T cells. However, the role of B cells is increasingly recognized, and highlighted in this review. Recent data suggest that tumors contain a diverse set of B cells refle

Method of Moments and T-Matrix Hybrid

Hybrid computational schemes combining the advantages of a method of moments formulation of a field integral equation and T-matrix method are developed in this article. The hybrid methods are particularly efficient when describing the interaction of electrically small complex objects and electrically large objects of canonical shapes such as spherical multilayered bodies where the T-matrix method

How Communicating Polygenic and Clinical Risk for Atherosclerotic Cardiovascular Disease Impacts Health Behavior : an Observational Follow-up Study

Background: Prediction tools that combine polygenic risk scores with clinical factors provide a new opportunity for improved prediction and prevention of atherosclerotic cardiovascular disease, but the clinical utility of polygenic risk score has remained unclear. Methods: We collected a prospective cohort of 7342 individuals (64% women, mean age 56 years) and estimated their 10-year risk for athe

The Gendered Possibilities for Participating in Agricultural Intensification in Sub-Saharan Africa – a Longitudinal Perspective from Seven Regions in Malawi, Tanzania and Zambia

This paper looks at the gendered possibilities for participating in agricultural intensification in seven regions in Malawi, Zambia and Tanzania, using a longitudinal, regional, mixed methods approach combining household level data on land, labour and use of agricultural techniques for male and female farm managers as well as qualitative data collected from within male-headed households and commun

Detailed measurements of the four extraocular rectus muscles’ contribution to the perfusion of the anterior segment of the eye

Background/aims Anterior segment ischaemia (ASI) is a rare but serious complication of strabismus surgery, which may be caused by damage to the anterior ciliary arteries that run along the rectus muscles. To avoid ASI, clinical praxis is to operate on a maximum of two rectus muscles at a time. The aim of this study was to perform a detailed study of the contribution of the four ocular rectus muscl

Green links: Corporate networks and environmental performance

We investigate the propagation of environmental performance among competitors and in customer–supplier relationships. We find causal effect among competitors, while the propagation from customers to suppliers and vice versa appears insignificant or does not survive identification tests. The effect is stronger among firms in highly concentrated competitor networks and towards firms with less market