This website is operated by the Unit for Educational Services at Lund University. Our mission includes supporting students in the digital work environment at the university. The Unit for Educational Services is part of Lund University's central administration, which means that we do not belong to any specific program or subject, but rather serve all students and staff equally.The primary contribut

https://www.campusonline.lu.se/en/about-us - 2025-06-03

We feel better if we thrive in our surroundings, and we work better when our work environment is adapted to our needs. It is easy to overlook the fact that this also applies to our digital work environment. The whole of your workplace needs to be functional, inviting and organised – for your sake. Here are a few tips on interior design for your computer, so that you don’t lose things deep in an un

https://www.campusonline.lu.se/en/learning-strategies/furnishing-your-digital-office - 2025-06-03

Are you a student at Lund University? Do you find the text on the university’s website complex or hard to navigate? Or do you struggle to find the information you’re looking for? If so, we’re looking for your input! We want the university’s content to be easy to find, understand, and use — for all students. This autumn term, 2024, we’re launching the Plain language project: Accessible digital text

https://www.campusonline.lu.se/en/help-us-improve-web-content-students - 2025-06-03

In recent years, reading by listening has become a widespread practice in higher education. Reading by listening involves listening to course literature read out by either a human or a speech synthesiser. The availability of study materials in a variety of formats is a welcome development, but you may need to experiment with your listening to find the right study technique. Increasing numbers of s

https://www.campusonline.lu.se/en/learning-strategies/reading-listening-study-technique-find-right-method - 2025-06-03

Do you have questions concerning your digital study environment that this website doesn’t answer? Or you want to ask a question in a personal meeting or in an email? Below, a variety of institutions at Lund University are listed that can help you with everything from printing a document to mental well-being in relation to your studies. Continue reading for information about what they do and how yo

https://www.campusonline.lu.se/en/academic-support - 2025-06-03

Efficient and secure data management is a key part of our service. This section outlines how we handle data delivery, storage, retention, and the specific deliverables included in each service. Delivery MethodData is provided via the SciLifeLab Datacenter Data Delivery System (DDS).Storage & RetentionCTG stores data on secure COSMOS-SENS servers (LUNARC, Lund University) for internal processing. D

https://www.ctg.lu.se/data-management - 2025-06-03

A list of all equipment used in our services. SequencersNovaSeq X plus, IlluminaNextSeq 2000, IlluminaMinION, Oxford Nanopore TechnologiesSingle-cellChromium X, 10x GenomicsVisium CytAssist, 10x GenomicscellenOne F1.4, CellenionCellaca MX, NexcelomQuality ControlQuantStudio 5 Real-Time PCR System, Thermo Fisher ScientificTapeStation 4200, AgilentFluoroskan Microplate Fluorometer, Thermo Fisher Sci

https://www.ctg.lu.se/services/equipment - 2025-06-03

The Chromium Epi Multiome ATAC + Gene Expression platform enables direct, simultaneous measurement of 3' gene expression and chromatin accessibility within single cells. This multiomic technique provides a detailed view of gene regulation by profiling both the epigenomic and transcriptomic landscapes from the same nuclei. It leverages bulk transposition of nuclei for efficient data collection. The

https://www.ctg.lu.se/services/single-cell/epigenetics - 2025-06-03

At CTG, we offer both sequencing-based and imaging-based spatial applications. These technologies provide comprehensive and high-resolution insights into tissue architecture, gene and protein expression. We offer 10x Genomics Visium v2, Visium HD on the CytAssist, and Xenium (coming Q3 2025, book consultations now!). Our workflows are compatible with FFPE tissue sections and can integrate high-res

https://www.ctg.lu.se/services/spatial - 2025-06-03

Visium v2 and Visium HD for FFPE tissue are probe-based spatial transcriptomics solutions for high-resolution gene expression analysis. Both kits can be combined with protein staining enables whole-transcriptome profiling with spatially barcoded probes and limited protein co-detection, including a panel for 31 immune proteins. Visium HD offers enhanced spatial resolution for deeper insights into t

https://www.ctg.lu.se/services/spatial/visium-v2-visium-hd - 2025-06-03

Xenium (Launching Q3 2025) enables high resolution through in situ sequencing with a predefined gene panel, offering cell segmentation. This cutting-edge approach allows for subcellular resolution, providing unparalleled insights into the spatial distribution of transcripts within specific cellular compartments. With Xenium, researchers can achieve precise cell segmentation and detailed analysis o

https://www.ctg.lu.se/services/spatial/xenium-situ-sequencing - 2025-06-03

The Center for Translational Genomics (CTG) was established in 2017 as a prioritized research infrastructure and open core facility within the Faculty of Medicine at Lund University specialized in providing expertise and services in advanced Next Generation Sequencing-based technologies, aiming to enable groundbreaking and innovative research in molecular life sciences. CTG collaborates closely wi

https://www.ctg.lu.se/welcome-ctg - 2025-06-03

High-throughput sequencing at cost-effective pricing Available KitsEach kit is defined by the number of reads (single-end or clusters) and read length (determined by cycle count).e.g. 10B, 300 cycle flowcell will deliver about 10 billion single-end reads sequenced with the following read structure: 150-10-10-150Sample Volume Requirements1.5B Flow Cell (2 lanes): 100 µl per lane (min 50 µl)10B Flow

https://www.ctg.lu.se/services/sequencing/novaseq-x-plus - 2025-06-03

Mid-throughput sequencing for maximum flexibility Available Kits - XLEAP-SBS Chemistry only.Each kit is defined by the number of reads (single-end or clusters) and read length (determined by cycle count).e.g. P4, 300 cycle flowcell will deliver about 1.8 billion single-end reads sequenced with the following read structure: 150-10-10-150Sample Volume RequirementsAll flow cells (P1, P2, P3, P4): 60

https://www.ctg.lu.se/services/sequencing/nextseq-2000 - 2025-06-03

Welcome to CTG! Center for Translational Genomics (CTG) is a research infrastructure and technical platform for Next Generation Sequencing (NGS) and other genomics technologies at the Medical Faculty of Lund University. Certified Service Providers for:    Xenium Services Launching Soon! We’re excited to announce that our Xenium services will be launching in Q3! Get ahead by contacting us for consu

https://www.ctg.lu.se/ctg-center-translational-genomics - 2025-06-03

We offer various DNA sequencing services, including Whole Genome Sequencing (WGS), Whole Exome Sequencing (WES), Targeted Gene Sequencing, Methylome Sequencing, Cell-Free DNA (cfDNA), and Small Genome Sequencing. All libraries are sequenced on Illumina platforms (NovaSeqXPlus or NextSeq2000). Unless specified otherwise, we use adapters with UMI and Unique Dual Indexes from IDT. Turnaround Time:Dat

https://www.ctg.lu.se/services/genomics - 2025-06-03

Molarity and amounts of library pool for sequencing Dilute library pool in EB buffer 10mM Tris-Cl, pH 8,5. Lower concentrations than stated below can be discussed. For NovaSeq: Molarity and volume depend on type of library and flowcell Unique dual index Delivery to CTG Fill in OrderForm, pool information, and SampleSheet for Illumina (csv file) and send to your contact at CTG.   Contact Informatio

https://www.ctg.lu.se/genomic-services/sequencing-only/sample-requirement - 2025-06-03

Our bioinformatics services include below analysis pipeline, deliverables and data management. Other pipelines can be discussed. Seq-Only Analysis pipelineDemultiplexing, involves in re-organizing the FASTQ files based on the sample index information, and generating the statistics and reporting files. This task will be performed using the bcl2fastq2 software with default settings.DeliverablesProje

https://www.ctg.lu.se/genomic-services/sequencing-only/bioinformatics-and-deliverables - 2025-06-03

DNA ExtractionWe recommend Qiagen spin column-based nucleic acids purification methods. Concentration and PurityUse spectrophotometrical method to get the concentration and a ratio (OD260/280 and OD260/230) of each sample.DNA should have an OD260/280 ratio ~1.8 and OD260/230 ratio in range 1.8-2.2 (the ratio shows purity of samples).DNA amount recommendedMethylation: Bisulfitconversion: 555 ng DNA

https://www.ctg.lu.se/genomic-services/array/sample-requirement - 2025-06-03

Our bioinformatics services include below analysis, deliverables and data management. AnalysisQC and bioinformatics analysis is done in Illuminas Genome Studio software.DeliverablesExcel file summarizing information about the experimental setup and methods (MIAME.xls)5 folder:DecodeData – files used during scanning.GenomeStudio – executable file (.bsc) for the created GenomStudio project.ImageData

https://www.ctg.lu.se/genomic-services/array/bioinformatics-and-deliverables - 2025-06-03